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Automating & reconciling credit card fees and gateway recommendations

We use Cybersource which is integrated well with NS but we have to log into their system daily and reconcile CC and Amex transactions and their associated fees. Wondering if anyone knows if we can bring theses transactions into NS through their API? Is this possible? We have to do the same for PayPal but the good thing about PayPal is they take their fees out same day where as with Cybersource it takes 1-2 full days to get their fees and reconcile them.

If there isn’t a way to bring this data in, are there any recommendations on gateways that automatically calculate the fees so we can reconcile these transactions easier?

Our ecommerce system is Magento and customer data flows back and forth through Celigo. Definitely clunky and often there are errors. Just trying to find a better solution to reconciling these fees and transactions.